Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MANKELKRGLGARHIQMIALGGTIGVGLFMGSASTISWTGPSVLLAYAICGIFIFFIMRAMGEMLYVEPSTGSFATFGHQYIHPMAGYITAWSNWFQWIIVGMSEIIAVGSYTKYWFPDLPAWIPGIVAMVILGAANLISVKSFGEFEFWFAMI------KIVTIILMIIAGIGIIFFGFGNGGDAIGLSNLWSHGGFFAGGFSGFFFALSLVIAAYQGVELIGITAGEAKDPQNTLRNAIQSIIWRILIFYIGAI---FVIVTVYP------WDELNSLGSPFVSTFSKIGITAAAGIINFVVITAAMSGCNSGIFSAGRMLYTLGVNGQAPKFFKKISRNGVPLYGTIAVLIGLAVGVVLNYIAPPKIFVYVYSASVLPG---MIPWFIIL-ISHIGFRKAKGAALDKHPFKMPFAPFTNYLTIAFLLMVLVGMWFNDDTRISLIV----GVIFLALVVISYYVFGIGKRTQANLTKSEQAAE------- |
| 4HU8 Chain:A ((3-452)) | ---NEITLTIG----QQKDLASMVP-AKFAGQELSWTSSDPETASVTDK-GIVTALKFSSGGANLFLKAPATGEAIITVTA-GKQSHSVKVITT-----VKGKEDIEKLPPLKDHFKDYF------LIGNIFNNRDVSGSMMDNDWLAHHYAILTPENHMKPSNLTNNRNETTGEITYTF---STADRMVNAAIAEGLKIHGHTLLWHQ-----------QIPPWQRSMESAAKDAALSVMKKYITEVMTHYKGKIYSWDVLNEIFPDGRGDNWTTAMRPENPWFKSIGSDFVYEAYLAARQADPNAILYYNDYNMDQAGKAALIAAMVRDVNAKYKQAYPRETRL-----LIEGIGMQSHHNMDVPASNIRNTINRYRELGVKISVSELDILCMGWSAFRGSTGQGADK--DDMTIATNRNILDQAYKFNEYMKLYLENSDIIERVSMWGVSDRYSWRSGGLPLLFDADNKAKPAYYSFVRAREDYEAAKA |
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General information:
TITO was launched using:
| RESULT:
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Template: 4HU8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -477289 for 3467 contacts (-137.7/contact) +
2D Compatibility (PS) -42963 + (NN) 5588 + (LL) 3076
1D Compatibility (HY) 4400 + (ID) 2900
Total energy: -510088.0 ( -147.13 by residue)
QMean score : 0.187
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