Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGAIERSGYTFQPEFSVVRQNGAIHVYHQGEFVEEIEFEFNGEYPDHDLIEELVNHYCFEHEI--
2KKE Chain:A ((1-53))
MVGRRPGGGLKDTKPVVVRL-----------YPDEIE-ALKSRVPANTSMSAYIRRIILNHLEDE
General information:
TITO was launched using:
RESULT:
Template:
2KKE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -4346 for 206 contacts (-21.1/contact) +
2D Compatibility (PS) -5147 + (NN) -1213 + (LL) 652
1D Compatibility (HY) -2400 + (ID) 500
Total energy: -12954.0 ( -62.88 by residue)
QMean score : 0.161
(partial model without unconserved sides chains):
PDB file :
Tito_2KKE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KKE-query.scw
PDB file :
Tito_Scwrl_2KKE.pdb
: