Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMVNKQLKKKAQEIGNVPTHYELEIEDYDQKQKKYGQAYFIWKDPKDPEKHITVELRNDGALLTFSTTVHSETDKKLPDAELKLTALQFAA-ANHPG-TFMNFHFQGKEERGQHIRFVYTKMELGLPIPNSGFLIDMTRSGQIVHFLYYGEGHKAEVPTEFVAKEKVVSHYLNTMSFELMYDVIDGEQEPRLVYEPILPGYSYPADVDEIVPDQHIADERIENTAPLPPLQNKEEVDIFALLGFTSDMQKVSERDFGEQIGSTWRRGAAPERKDLSIGSYFETRNKNTIKMKTDKRTGKLKAALSFMDWRNNLQCSTEECQEIALQFLYALYPRAAEFFRVNPVRIDERGRVRNHFSVWYKGVPLRFGAARIIVNPETGLIDAFMAPDIEPEQLEAINHRPDVSAEEAKEAFLAAFDVKLEWQPDFTAGSDQHCKLVYKPVYPSYIDAHIRKKKRL
4IPB Chain:A ((29-129))----------------------------------GYYCANFAMN---GFTKNVWFNVRGQWVMTLTDLV---S----LDRLTPTVYNAFVSGPYANWVVDNVTMVEFPKWQAIIVIKVGQ--DN---VDIKYQLFYTPQGILLKTRNVSD-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4IPB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 389 -52309 -134.47 -528.37
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain A : 0.55

3D Compatibility (PKB) : -134.47
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.55
QMean score : 0.449

(partial model without unconserved sides chains):
PDB file : Tito_4IPB.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4IPB-query.scw
PDB file : Tito_Scwrl_4IPB.pdb: