Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTVRYQIEQLGDSAMMIRFGEE-INEQVNGIVHAAAAYIEEQPFPGFIECIPAFTSLTVFYDMYEVYKHLPQGISSPFESVKRDVEERLAEIAEDYEVNRRIVEIPVCYGGEFGP-------------------DLEEVAKINQLSPEEVIDIHTNGEYVVYMLGFA-PGFPFLGGMSKRIAA--PRKSSPRPSIPAGSVGIAGLQTGVYPIS-TPGGWQLIGKTPLALFRPQE------NPPTLLRAGDIVKFVRISEKDYHAYKEESN
3VA7 Chain:A ((836-1101))--PKVTYRQAGDRYILVEYGELEFDLNICYRINRLIHQVERHQTVGIVEMSQGVRSVLIEFDGSKINQKALLK------CLIAYESEIQFDK--NWNVKSKIFKLPMAFEDSKTLDCVTRYRETIRSEAPWLPNNVDFIADVNDIDRNDVKNMLYSAKFMVLGLGDVFLGSPCAVPLDPRHRYLGTKYNPSRTYTARGVVGIGGMYMCIYNAEGSPGGYQLVGRTIT-AWDKLVIGDHPIDHPWLLTPFDQVEFYPVTEEELEVIIEDN-


General information:
TITO was launched using:
RESULT:

Template: 3VA7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1125 -142002 -126.22 -622.81
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain A : 0.71

3D Compatibility (PKB) : -126.22
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.71
QMean score : 0.587

(partial model without unconserved sides chains):
PDB file : Tito_3VA7.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3VA7-query.scw
PDB file : Tito_Scwrl_3VA7.pdb: