Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-----MKVFEAKTLLSEATDRAKEYKELRTQ----------------------MVNLRKALKGVADLSDSEFSGKGASNIKAFYHDHVGVAD-------------------QWIDYIDMKIAFFNSIAGAAEDKGLSDAYIEESFLEHELANANKKSKSI-MSEQKKAMKDILNDIDDILPLDLFSTETFKDELADANDKRKKTLEKLDALDEDLKTEYALSEPNEQFIKSDFQKLQEATGKGKNATPIHYNAK---AYR-----ESDIHKKKGDIEKRTEAYLKI-KKEEAKEREIEKLKERLKNYDYADADEFYE-MAKTIG-----------YENLTAE-------------QQRYFTQIENTRELEAGFKG----VAVGL---------------YDSGKDAVVGLWDMVTDPGGTVEAITGAMAH---------PIKTYEAISAAIEESY-----------QKDMVN--GDTYSRARWVSYAVGTVV-------------TSIVGTKG--VGAVSKTGTAAKVTTKVKTAASKSATAQKAITVSK-------QTVDHIKQK-----VNTGIEVSKKHVKTKLNQIGDLTLADILPYHPRHDL----VPAGVPYNAVN-GVTLKEGLQKFAKVILPKPYGTSSSGRRTPAPHVPPVTVKYGEHF---ARWSRKKVLKPNIIYKT----KEGYTYTTDNY------GRITSVKADLQLGEAKRNQYAQTNAGKPQDRKPDDDG------GHLIATQFKGSGQFDNIVPMNSQINR-SGGKWY--EMEQEWAKALSKKPPKK--------VAVQIEPVYSGDSLRPSYFDVTYKIGSRKEISVSIKNQPGG------------------------------------------
5DZT Chain:A ((4-992))NLINVLSINERCFLLKQSGNEKYDIKNLQAWKERKSVLKQDDLDYLIKYKYESLDNFGLGITPIENFPDKEVAIQYIKD-QSWYIFFESILDSYNDSEEQLLEVDASYPFRYFLQYARLFLLDLNSELNICTKEFIINLL---EILTQELIHLTSKTLVLDLHRFIYYLKKRFNSKKDIIAFYTCYPELMRITVVRMRYFLDNTKQMLIRVTEDLPSIQNCFNIQSSELNSISESQGDSHSRGKTVSTLTFSDGKKIVYKPKINSENKLRDFFEFLNKELEADIYIVKKVTRNTYFYEEYIDNIEINNIEEVKKYYERYGKLIGIAFLFNVTDLHYENIIAHGEYPVIIDNETFFQQNIPIEFGNSATVDAKYKYLDSIMVTGLVPKNTPIMNNEKISFISYEKYIVTGMKSILMKAKDSKKKILAYINNNLQNLIVRNVIRPTQRYADMLEFSYHPNCFSNAIEREKVLHNMWAYPYKNKKVVHYEFSDLIDGDIPIFYNNISKTSLIASDGCLVEDFYQESALNRCLNKINDLCDEDISIQTVWLEIALNIYNPYKYINDLKNQNSNKYIYTGLELNGK-IIQACQKIEKKIFKRAIFNKKTNTVNWIDIKLDQDWNVGILNNNMYDGLPGIFIFYVALKYITKNHKYDYVIECIKNSIYTIPSEDILSAFFGKGSLIYPLLVDYRLNNDINSLNVAVEIADMDWIHGHNSIIKVLLLLSEITEDEKYRKFSLEIFEKLSEEPYFNFRGFGHGIYSYVHLLSKFNRIDKANSLLHKIKNNSWCKGTVGELLATDINKTIEYKNKDCLCHGNAGTLEGLIQLAKKD----PETYQYKKNKLISYMLKYFEKNNTLKVAGSEYLESLGFFVGISGVGYELLRNLDSEIPNALLFE


General information:
TITO was launched using:
RESULT:

Template: 5DZT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2331 -81769 -35.08 -123.89
target 2D structure prediction score : 0.42
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : -35.08
2D Compatibility (Sec. Struct. Predict.) : 0.42
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.143

(partial model without unconserved sides chains):
PDB file : Tito_5DZT.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5DZT-query.scw
PDB file : Tito_Scwrl_5DZT.pdb: