Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLMNEFEKACETLRKFMAYMLEK-DMKSWTELWDENAVFEFPYAPEGSPKRIEGKAAIYDYIKDYPKQIHLSSFTAPTVYRSADSNTVIAEFQCDGHVIETGLPYRQSYISVIETRDGRIVRYRDYWNPLVVKEAFGGSFLQTEESGK
4J9A Chain:G ((2-123))---NAKEIVVHALR-----LLENGDARGWSDLFHPEGVLEYPYPPPGYKTRFEGRETIWAHMRLFPEYMT------VQFYETADPDLAIGEFHGD------------DYIAVWRTRDGQILLYRLFFNPLR-----------------


General information:
TITO was launched using:
RESULT:

Template: 4J9A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain G - contact count / total energy / energy per contact / energy per residue : 419 -41157 -98.23 -395.74
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain G : 0.72

3D Compatibility (PKB) : -98.23
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.72
QMean score : 0.627

(partial model without unconserved sides chains):
PDB file : Tito_4J9A.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4J9A-query.scw
PDB file : Tito_Scwrl_4J9A.pdb: