Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIVTNDQELEGLKKIGRIVALAREEMKRKAEPGMSTKDLDLI-GKAVLDEHGAVSAPEKEYDFPGVTCISVNDEVAHGIPSTSKILKAGDLVNIDISAEFGGFYSDTGISFVLGEGEERLHKLCQCAENAFQKGLQQAKAGKRQNQIGRAVYHEARSQGFTVIKTLTGHGIGRSLHEAPNHIMNYYDPFDNALFKNGTVIALEPFISTKAETIVEAGDGWTFKTPDKSMVAQVEHTIVITKDEPIILTKL
2Q96 Chain:A ((4-248))--IKTPEDIEKMRVAGRLAAEVLEMIEPYVKPGVSTGELDRICNDYIVNEQHAVSACLGYHGYPKSVCISINEVVCHGIPDDAKLLKDGDIVNIDVTVIKDGFHGDTSKMFIVGKPTIMGERLCRITQESLYLALRMVKPGINLREIGAAIQKFVEAEGFSVVREYCGHGIGRGFHEEP-QVLHYDSRETNVVLKPGMTFTIEPMVNAGKKEIRTMKDGWTVKTKDRSLSAQYEHTIVVTDNGCEILT--


General information:
TITO was launched using:
RESULT:

Template: 2Q96.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1417 -109267 -77.11 -447.81
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain A : 0.78

3D Compatibility (PKB) : -77.11
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.567

(partial model without unconserved sides chains):
PDB file : Tito_2Q96.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2Q96-query.scw
PDB file : Tito_Scwrl_2Q96.pdb: