Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMETFKSILHEAQRIVVLTGAGMSTESGIPDFRSAGGIWTEDASRMEAMSLDYFLSYPRLFWPKFKE-LFQMKMSGSFEPNEGHLLLAELEKQGKQVDIFTQNIDGLHKKAGSRHVYELHGSIQTAACPACGARYDLPHLLER----EVPECTAAGNNGDICGTVLKTDVVLFGDAVMHFDTLYEKL---DQADLLLVIGTSLEVAPARFVPEDASLIPGMKKVIINLEPTYCDSLFDMVIHQKIGEFARSLGMKK
2H59 Chain:B ((3-239))MKEFLDLLNESRLTVTLTGAGISTPSGIPDFRGPNGIYKKYSQNV--FDIDFFYSHPEEFYRFAKEGIFPMLQA---KPNLAHVLLAKLEEKGLIEAVITQNIDRLHQRAGSKKVIELAGNVEEYYCVRCEKKYTVEDVIKKLESSDVPLC-------DDCNSLIRPNIVFFGENLPQ-DALREAIGLSSRASLMIVLGSSLVVYPAAELPL-ITVRSGGKLVIVNLGETPFDDIATLKYNMDVVEFARRV----


General information:
TITO was launched using:
RESULT:

Template: 2H59.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1242 -145043 -116.78 -633.38
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain B : 0.78

3D Compatibility (PKB) : -116.78
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.517

(partial model without unconserved sides chains):
PDB file : Tito_2H59.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2H59-query.scw
PDB file : Tito_Scwrl_2H59.pdb: