Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKIAIAAITATSILALSACSSGDKEVIAKTDAGDVTKGELYTNMKKTAGASVLTQLVQEKVLDKKYKVSDKEIDNKLKEYKTQLGDQYTALEKQYGKDYLKEQVKYELLTQKAAKDNIKVTDADIKEYWEGLKGKIRASHILVADK--------------KTAEEVE-------KKLKKGEK-FEDLAKEYSTDSSASKGGDLGWFAKEGQMDETFSKAAFKLKTGEVSDPVKTQYGYHIIKKTEERGKYDDMKKELKSEVLEQKLNDNAAVQEAVQKVMKKADIEVKDKDLKDTFNTSSTSNSTSSSSSNSK
2ZR4 Chain:A ((49-163))----------------------------------------------------------------------------------------------------------------------------------QGEPARVRCSHLLVKHSQSRRPSSWRQEKITRTKEEALELINGYIQKIKSGEEDFESLASQFSDCSSAKARGDLGAFSR-GQMQKPFEDASFALRTGEMSGPVFTDSGIHIILRTE--------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2ZR4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 399 -22290 -55.86 -239.67
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : -55.86
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.663

(partial model without unconserved sides chains):
PDB file : Tito_2ZR4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2ZR4-query.scw
PDB file : Tito_Scwrl_2ZR4.pdb: