Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEIERINEHTVKFYMSYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHEEEEFAVEGPLWIQVQALDKGLEIIVTKAQLSKDGQKLELPIPED-KKQEPASEDLDALLDDFQKEEQAVNQEEKEQKLQFVLRFGDFEDVISLSKLNVNGSKTTLYSFENRYYLYVDFCNMTDEEVENQLSILLEYATESSISIHRLEEYGKLIISEHALETIKKHFAS
1DMG Chain:A ((1-225))AQVDLLNVK--------GEKVGTLEISDFVF-NIDPNYDVMWRYVDMQLSD-----------WSKKLNKKMKKLALRSALSVKYRENKLLVLDDLKLERPKTKSLKEILQNLQLSDK--------KTLIVLPWKEEGYMNVKLSGRNLPD-------------VKVIIADNPNNSKNGE-----KAVRIDGLNVFDMLKYDYLVLTRDMVSKIEEVLG-


General information:
TITO was launched using:
RESULT:

Template: 1DMG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 775 -67129 -86.62 -392.57
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : -86.62
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.310

(partial model without unconserved sides chains):
PDB file : Tito_1DMG.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1DMG-query.scw
PDB file : Tito_Scwrl_1DMG.pdb: