Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKFSEECRSAAAEWWEGSFVHPFVQGIGDGTLPIDRFKYYVLQDSYYLTHFAKVQSFGAAYAKDLYTTGRMASHAQGTYEAEMALHREFAELLEISEEERKAFKPSPTAYSYTSHMYRSVLSGNFAEILAALLPCYWLYYEVGEK---LLHCDPGHPIYQKWIGTYGGDWFRQQVEEQINRFDELAENSTEEVRAKMKENFVISSYYEYQFWGMAYRKEGWSDSAIKEVEECGASRHNG
2GM7 Chain:C ((14-218))-----ELRRRADGIWQRILAHPFVAELYAGTLPMEKFKYYLLQDYNYLVNFAKALSLAASRAPSVDLMKTALELAYGTVTGEMANYEALLKEVGLSLRDAAEAEPNRVNVSYMAYLKSTCALEGFYQCMAALLPCFWSYAEIAERHGGKLRENPVH-VYKKWASVYLSPEYRGLVERLRAVLDS-SGLSAEELWPYFKE----ASLYELEFWQAAY-----------------------


General information:
TITO was launched using:
RESULT:

Template: 2GM7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 876 -107017 -122.17 -529.79
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain C : 0.72

3D Compatibility (PKB) : -122.17
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.72
QMean score : 0.459

(partial model without unconserved sides chains):
PDB file : Tito_2GM7.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2GM7-query.scw
PDB file : Tito_Scwrl_2GM7.pdb: