Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKAVIAKNEEQLKDAFYVREEVFVKEQN-VPAEEE-I-DE-LENESEHIVVYDGEKPVGAGRWRMK----------------DGYGKLERICVLKSHRSAGVGGIIMKALEKAAADG-GASGFILNAQTQAVPFYKKHGYRVLSEKE-FLDAGIPHLQMMKD
1KUX Chain:A ((37-192))---FRCLTPEDAAGVFEIEREAFISVSGNCPLNLDEVQHFLTLCPELSLGWFVEGRLVAFIIGSLWDEERLTQESLALHRPRGHSAHLHALAVHRSFRQQGKGSVLLWRYLHHVGAQPAVRRAVLMCEDALVPFYQRFGFHPA-GPCAIVVGSLTFTEMH--


General information:
TITO was launched using:
RESULT:

Template: 1KUX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 580 -92779 -159.96 -692.38
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : -159.96
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.373

(partial model without unconserved sides chains):
PDB file : Tito_1KUX.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1KUX-query.scw
PDB file : Tito_Scwrl_1KUX.pdb: