Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence----------MTQMRF------TEEDF------NTFTIEGLDARMEVLKETV---------RPKLTALGE--HFAP-TLSALTGDEMFPHVAKHARRSVNPPADSWVAFANSKRG---------YKKLP---------HFQI-------GLWESHVFVW-FAIIYESPIKEEYGK------------LLEVNQE------TITKNIPDSFVWSADHTKPGVHKQSEMDKEQLKTLFE---RLQTVKKAELLCGIQLQKEEVLNMNNQEFLQR--------------IDDAFKQLAFLYRLTQKVTQA------
4BE3 Chain:A ((1-312))TKYPSELIPQMDEWKILLGDGTHKEDLVNYAKDDFFYVEHENETDWVVFKTPNSGITSRTSSNTRTELGQKKHWIPETGGKLNATLKVQHVSTSGDARVAASYSVVVGQIHSDEGHENEPIKIFYKKFPGHTKGSVFWNYEINTKGDNSKRWDYSTAVWGYDMSVVGPTATSYPEEPEDGIALGEEFSYEINVYEGIMYLTFSSEGHKTIKFTKNLLKSNFTKKSDI-PQQIKTLYASIGRDGIERENAYAGEIQYFKLGAYNQTNGKSPEDNLVWSTGADVYDGDIAKQYANGSYAEVWFKEATLGSGSAPE


General information:
TITO was launched using:
RESULT:

Template: 4BE3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1028 -15417 -15.00 -73.06
target 2D structure prediction score : 0.32
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : -15.00
2D Compatibility (Sec. Struct. Predict.) : 0.32
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.066

(partial model without unconserved sides chains):
PDB file : Tito_4BE3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4BE3-query.scw
PDB file : Tito_Scwrl_4BE3.pdb: