Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-------MNKHKKIPLRKCVVTGEM---------KPKKELIRVV-----RSKEGEISVDPTGKKNG-RGAYLTLDKECI-----LAAKKKNTLQNQFQSQIDDQIFDELLELAEKVKK
5EK5 Chain:A ((6-123))QRYISIRNTDTIWLPGNICAYQFRLDNGGNDEGFGPLTITLQLKDKYGQTLVTRKMETEAFGDSNATRTTDAFLETECVENVATTEIIKATEESNGHRVSLPLSVFDPQDYHPLLITV


General information:
TITO was launched using:
RESULT:

Template: 5EK5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 316 -7995 -25.30 -87.86
target 2D structure prediction score : 0.36
Monomeric hydrophicity matching model chain A : 0.60

3D Compatibility (PKB) : -25.30
2D Compatibility (Sec. Struct. Predict.) : 0.36
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.326

(partial model without unconserved sides chains):
PDB file : Tito_5EK5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5EK5-query.scw
PDB file : Tito_Scwrl_5EK5.pdb: