Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSTVLFVKSSDRTAEEGVSTKLYEAFLAAYKENNPNDEVVELDLHKENLPYLGRDMIN--GTFKAGQGME-MTEDEKKQAAIADKYLNQFVKADKVVFAFPLWNFTVPAVLHTYVDYLSRAGVTFKYTQEGPVGLMGGKKVALLNARGGVYSEGPMAALEMSLNFMKTVLGFWGVQDLHTVVIEGHNAAPDQAQEIVEKGLQEAKDLAAKF
3W78 Chain:C ((2-211))-TKVLFITANPNSAEGSFGMAVGEAFIEAYKNEHPQDEVVTIDLFNTTVPAIDADVFAAWGKFAAGEGFEALTEVQQQKVAAMNTNLETFMNADRYVFVTPMWNFSYPPVVKAYLDNVAIAGKTFKYTENGPVGLLEGKKALHIQATGGVYSEGAYAAVDFGRNHLKTVLGFVGVNDTEYIAVEGMNANPEKAQEIKEAAIANARELAKRF


General information:
TITO was launched using:
RESULT:

Template: 3W78.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 941 -42789 -45.47 -206.71
target 2D structure prediction score : 0.81
Monomeric hydrophicity matching model chain C : 0.85

3D Compatibility (PKB) : -45.47
2D Compatibility (Sec. Struct. Predict.) : 0.81
1D Compatibility (Hydrophobicity) : 0.85
QMean score : 0.598

(partial model without unconserved sides chains):
PDB file : Tito_3W78.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3W78-query.scw
PDB file : Tito_Scwrl_3W78.pdb: