Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMMEKTFIMVKPDGVQRQLIGDILSRFERKGLQLAGAKLMRVTEQMAEKHYAEHQGKPFFGELVEFITSGPVFAMVWEGENVIEVTRQLIGKTNPKEALPGTIRGDYGMFVGKNIIHGSDSLESAEREINIFFKNEELVSYQQLMAGWIY
3Q8V Chain:B ((1-148))-MERTFLMIKPDAVQRNLIGEVISRIERKGLKLVGGKLMQVPMELAETHYGEHQGKPFYNDLISFITSAPVFAMVVEGEDAVNVSRHIIGSTNPSEASPGSIRGDLGLTVGRNIIHGSDSLESAEREINLWFNENEITSYASPRDAWLY


General information:
TITO was launched using:
RESULT:

Template: 3Q8V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 683 -72891 -106.72 -492.51
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain B : 0.93

3D Compatibility (PKB) : -106.72
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.93
QMean score : 0.547

(partial model without unconserved sides chains):
PDB file : Tito_3Q8V.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3Q8V-query.scw
PDB file : Tito_Scwrl_3Q8V.pdb: