Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMMDFLSKTPEP-PYYAVIFSSVKSENDTGYGETAERMVSLAADQPGFLGVESVR---EADGRGITVS-YWDSMDAINHWRHHTEHQAAKEKGRSVWYESYAVRVAKVDRQRLFQENTND
3BDE Chain:A ((18-116))---------QGMIRHTVVFTLKHASHSLEEKRFLVDAKKILSAIRGVTHFEQLRQISPKIDYHFGFSMEFADQAAYTRYNDHPDHVAFVRD----RWVPEVEKFLEIDYVPL-------


General information:
TITO was launched using:
RESULT:

Template: 3BDE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 341 -5252 -15.40 -55.87
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain A : 0.61

3D Compatibility (PKB) : -15.40
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.605

(partial model without unconserved sides chains):
PDB file : Tito_3BDE.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3BDE-query.scw
PDB file : Tito_Scwrl_3BDE.pdb: