Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence------------------------------------------MKSAYIHIPFCEHICHYCDFNKYF--IQSQPVDEYLNALEQEMINTIAKTGQPDLKTIFIGGGTPTSLSE--EQLKKLMDMINRVLKPSSDLSEFAVEANPDDLSAEKLKILKEAGVNRLSFGVQTFEDDLLEKIGRVHKQKDVFTSFERAREIGFENISLDLMFGLPGQTLKHLEHSINTALSLDAEHYSVYSLIVEPKTVFYNLMQKGRLHLPPQEQEAEMYEIVMSKMEAHGIHQYEISNFAKAGMESKHNLTYWSNEQYFGFGAGAHGYIGGTRTV--NVGPVKHYIDLIAEKGFPYRDTHEVTTEEQIEEEMFLGLRKTAGVSKKRFAEKYGRSLDGLFPSVLKDLAEKGLIHNSESAVYLTHQGKLLGNEVFGAFLGEL
3T7V Chain:A ((12-348))SLGDKVIEGYQLTDNDLRTLLSLESKEGLERLYSAARKVRDHYFGNRVFLNCFIYFSTYCKNQCSFCYYNCRNEINRYRLTMEEIKETCKTLKGAGFHMVDLTMGEDPYYYEDPNRFVELVQIVKEELGLPIMIS-------PGLMDNATLLKAREKGANFLALYQETYDTELYRKLRVGQSFDGRVNARRFAKQQGY-CVEDGILTGV-GNDIESTILSLRGMSTNDPDMVRVMTFLPQEGT-------------PLEGFRDKSNLSELKIISVLRLMFPKRLIPASLDLEG--------------IDGMVLRLNAGANIVTSILPPDS------------QLEGVANYDRDLEERDR-------------------------DIKSVVRRLEIMGMKPARQADFEAVL-----------------


General information:
TITO was launched using:
RESULT:

Template: 3T7V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1553 60533 38.98 209.46
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain A : 0.61

3D Compatibility (PKB) : 38.98
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.245

(partial model without unconserved sides chains):
PDB file : Tito_3T7V.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3T7V-query.scw
PDB file : Tito_Scwrl_3T7V.pdb: