Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMERIYLDHAATSPMDERVLEQMIPHFSGSFGNPSSIHSFGRESRKWVDEARAQIAAEIGAAEQEIIFTSGGTEADNLAIMGTALA---RKDLGR---HIITTKIEHHAVLHTCEKLEGDGF-DITYLDVDQ-NGRVSAKQVKEALRDDTILVTVMYGNNEVGTVQPIEEIGELLKE----------HKAYFHTDAVQAFGLLPIDVKNSHIDLLSVSGHKLNGPKGTGFLYASKDVKLSPL---LFGGEQERKRRAGTENVPGIVGLKEAIKLSSEE--------RDEKNEKYQSFKAIFADTL----RDAGVAFEVNGDKEHSLPHVLNLYFPGVSVEALLVNLDMAGVAVSSGSACTAG-SVLPSHVLTAMFGEESDRLTSSIRISFGLGNTAEQVKTAAKHVADVVKRLT
3A9Z Chain:B ((19-428))--KVYMDYNATTPLEPEVIQAVTEAMKEAWGNPSSSYVAGRKAKDIINTARASLAKMIGGKPQDIIFTSGGTESNNLVIHSTVRCFHEQ-----TRPHFITCTVEHDSIRLPLEHLVEDQVAEVTFVPVSKVNGQVEVEDILAAVRPTTCLVTIMLANNETGVIMPISEISRRIKALNQIRAASGLPRVLVHTDAAQALGKRRVDVEDLGVDFLTIVGHKFYGPR-IGALYVRGVGKLTPLYPMLFGGGQERNFRPGTENTPMIAGLGKAADLVSENCETYEAHMRDIRDYLEERLEAEFGKRIHLNSRFPGV---------ERLPNTCNFSIQGSQLRGYMVLAQCQTLLASVGASCHSDHEDRPSPVLLSC-GIPVDVARNAVRLSVGRSTTRAEVDLIVQDLKQAVNQL-


General information:
TITO was launched using:
RESULT:

Template: 3A9Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1995 77482 38.84 215.23
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain B : 0.77

3D Compatibility (PKB) : 38.84
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.462

(partial model without unconserved sides chains):
PDB file : Tito_3A9Z.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3A9Z-query.scw
PDB file : Tito_Scwrl_3A9Z.pdb: