Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPRVKGGTVTRKRRKKVLKLAKGYFGSKHTLYKVANQQVMKSGNYAFRDRRQKKRDFRKLWITRINAAARMNGLSYSRLMHGLKLSGIEVNRKMLADLAVNDLTAFNQLADAAKAQLNK
2GHJ Chain:A ((18-116))-------------------LAKGYRGQRSRSYRRAKEAVMRALYYQYRDRKLRKREFRRLWIARINAAVRAYGLNYSTFINGLKKAGIELDRKILADMAVRDPQAFEQVVNKVKEALQ-


General information:
TITO was launched using:
RESULT:

Template: 2GHJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 208 -28308 -136.09 -285.93
target 2D structure prediction score : 0.76
Monomeric hydrophicity matching model chain A : 0.81

3D Compatibility (PKB) : -136.09
2D Compatibility (Sec. Struct. Predict.) : 0.76
1D Compatibility (Hydrophobicity) : 0.81
QMean score : 0.643

(partial model without unconserved sides chains):
PDB file : Tito_2GHJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2GHJ-query.scw
PDB file : Tito_Scwrl_2GHJ.pdb: