Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMREELKGIFASVFGEKEGLRFFFAPGRVNLIGEHTDYNGGHVFPCALTMGTYAAVAERNDGLVRMYSDNFRNAGIKECSLDDIRYQKEDDWANYPKGVIYEFQQRGYAVPHGFDIVFSGNIPNGAGLSSSASIELLMGVVLQSYFHPEVDALELVKMAQHAENHFIGVNCGIMDQFAIGMGKKHHAMLLNCDTLDYEYSKLNVSGLALVIANTNKKRTLADSSYNTRRQECNDALLDLKKGLDIAALGDIKPSDFDAHSSLIQNETNRRRAKHAVYENHRAIKTAHMFKENNIDEIGQLMKESHLSLKDDYEVTCPELDELVFAAWDHEGVIGSRMTGAGFGGCTISIVKDEFVDDFIQKVGDRYQEKTGLRADFYVADIGEGARELKGE
1FWK Chain:A ((1-296))MKVRVKAPCTSA----------------NL---------------GVGFDVFGLCLKEPYDVIEVEAIDDKEIIIEV-DDKNIPTDPDKNVAGIVAKKMIDDFNI----GKGVKITIKKGVKAGSGLGSSAASSAGTAYAINELFKLNLDKLKLVDYASYGELASSGA--KHADNVAPAIF----------------------GGFTMVTNYEPLEVLHIPID-----FKLDILIAIPNISINTKEAREILPKAVG--------------LKDLVNNVGKACGMVYALYNKDKSLFGRYMMSDKVIEPVRGK-LIPNYFKIKEEV--KDKVYGITISGSGPS--IIAFPKEEFIDEVENILRDYYEN-------TIRTEVGKGVEVV---


General information:
TITO was launched using:
RESULT:

Template: 1FWK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1821 -149287 -81.98 -504.35
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : -81.98
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.399

(partial model without unconserved sides chains):
PDB file : Tito_1FWK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1FWK-query.scw
PDB file : Tito_Scwrl_1FWK.pdb: