Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPKSKVRKKNDFTVSAVSRTPMKVKVGPSSVWFVSLFIGLMLIGLIWLMVFQLAAIGSQAPTALNWMAQLGPWNYAIAFAFMITGLLLTMRWH
1Q90 Chain:M ((10-26))
---------------------------------ALTMVGMTLVGLAIGFV-------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1Q90.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8224 for 59 contacts (-139.4/contact) +
2D Compatibility (PS) -1636 + (NN) -248 + (LL) 6008
1D Compatibility (HY) -1600 + (ID) 250
Total energy: -5950.0 ( -100.85 by residue)
QMean score : 0.675
(partial model without unconserved sides chains):
PDB file :
Tito_1Q90.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Q90-query.scw
PDB file :
Tito_Scwrl_1Q90.pdb
: