Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVAPHEDPEDHVAPAAQRVRAGTLLLANTDLLEPTFRRSVIYIVEHNDGGTLGVVLNRPSETAVYNVLPQWAKL--AAKPKTMFIGGPVKRDAALCLAVLRVGADPEGVPGLRHVAGRLVM-VDLDADPEVLA--AAVEGVRIYAGYSGWTIGQLEGEIERDDWIVLSALPSDVLVGPRADLWGQVLRRQPLPLSLLATHPIDLSRN
2EW0 Chain:A ((5-179))
------------------YLTHRCLIAPPEMADDFFANTVIYLARHDEEGAQGIIINRPAGIQIKELLNDLDIDADNVNPHEVLQGGPLRPEAGFVLHTGQPT--WH---SSIAVGENVCITTSKD-ILDAIAHNEGVGRYQIALGYASWGKNQLEDEIARGDWLICDADMDLIFNLPYDDRWDAAYKKIGVDRTWLAS--------
General information:
TITO was launched using:
RESULT:
Template:
2EW0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -126608 for 1281 contacts (-98.8/contact) +
2D Compatibility (PS) -18253 + (NN) -5515 + (LL) 1404
1D Compatibility (HY) -10400 + (ID) 2050
Total energy: -161422.0 ( -126.01 by residue)
QMean score : 0.368
(partial model without unconserved sides chains):
PDB file :
Tito_2EW0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2EW0-query.scw
PDB file :
Tito_Scwrl_2EW0.pdb
: