Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSVVRSIGKKMQRISGPNALAVKGRPTQVYGHTHVRLDCRFMADSEFTAPEVTQLAEGLHRALSKLISMLRRGDPNGAAAGDLTLAQLSILVTLLDQGP---IRMTDLAAHERVRTPTTTVAIRRLEKIGLVKRSRDPSDLRAVLVDITPQGRAVHGE----SLANRRAALAALLSQLPRSDLETLRKALAPLERLASGEPASGPASNSPARKRA |
5DD8 Chain:B ((63-179)) | ------------------------------------------------------------------------------AASGLNAAGWDLLLTLYRSAPPEGLRPTELSALAAISGPSTSNRIVRLLEKGLIERRE-------ASIRLTPQGRALVTHLLPAHLATTQRVLAPLSAQEQRTLEELAGRMLAGLEQ-------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5DD8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -35525 for 603 contacts (-58.9/contact) +
2D Compatibility (PS) -11085 + (NN) -4160 + (LL) 5404
1D Compatibility (HY) -4800 + (ID) 1900
Total energy: -52066.0 ( -86.34 by residue)
QMean score : 0.598
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