Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSVVRSIGKKMQRISGPNALAVKGRPTQVYGHTHVRLDCRFMADSEFTAPEVTQLAEGLHRALSKLISMLRRGDPNGAAAGDLTLAQLSILVTLLDQGP---IRMTDLAAHERVRTPTTTVAIRRLEKIGLVKRSRDPSDLRAVLVDITPQGRAVHGE----SLANRRAALAALLSQLPRSDLETLRKALAPLERLASGEPASGPASNSPARKRA
5DD8 Chain:B ((63-179))------------------------------------------------------------------------------AASGLNAAGWDLLLTLYRSAPPEGLRPTELSALAAISGPSTSNRIVRLLEKGLIERRE-------ASIRLTPQGRALVTHLLPAHLATTQRVLAPLSAQEQRTLEELAGRMLAGLEQ--------------------


General information:
TITO was launched using:
RESULT:

Template: 5DD8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -35525 for 603 contacts (-58.9/contact) +
2D Compatibility (PS) -11085 + (NN) -4160 + (LL) 5404
1D Compatibility (HY) -4800 + (ID) 1900
Total energy: -52066.0 ( -86.34 by residue)
QMean score : 0.598

(partial model without unconserved sides chains):
PDB file : Tito_5DD8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5DD8-query.scw
PDB file : Tito_Scwrl_5DD8.pdb: