Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSEHQSLPAPEASTEVRVAIVGVGNCASSLVQGVEYYYNADDTSTVPGLMHVRFGPYHVRDVKFVAAFDVDAKKVGFDLSDAIFASENNTIKIADVAPTNVIVQRGPTLDGIGKYYADTIELSDAEPVDVVQALKEAKVDVLVSYLPVGSEEADKFYAQCAIDAGVAFVNALPVFIASDPVWAKKFTDARVPIVGDDIKSQVGATITHRVLAKLFEDRGVQLDRTMQLNVGGNMDFLNMLERERLESKKISKTQAVTSNLKREFKTKDVHIGPSDHVGWLDDRKWAYVRLEGRAFGDVPLNLEYKLEVWDSPNSAGVIIDAVRAAKIAKDRGIGGPVIPASAYLMKSPPEQLP--DDIARAQLEEFIIG |
| 3QVS Chain:A ((179-390)) | ------------------------------------------------------------------------------------------------------------------------------------------------------ASASMLYAYAALKLGLPYANFTPSPGSAIPALKELAEKKGVPHAGNDG--KTGETLVKTTLAPMFAYRNMEVVGWMSYNILGDYDGKVLSARDNKESKVLSKDKVLEKMLGY----SPYSITEIQYFPSLVDNKTAFDFVHFKGFLGKLMKFYFIWDAIDAIVAAPLILDIARFLLFAKKKGVKGVVKEMA-FFFKSPMDTNVINTHEQFVVLKEWYSN |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QVS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -19678 for 1637 contacts (-12.0/contact) +
2D Compatibility (PS) -22515 + (NN) -8483 + (LL) 10160
1D Compatibility (HY) -7200 + (ID) 2500
Total energy: -50216.0 ( -30.68 by residue)
QMean score : 0.363
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