Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTRRTGQRWRGTLPGRRPWTRPAPATCRRHLAFVELRHYFARVMSSAIGSVARWIVPLLGVAAVASIGVIADPVRVVRAPALILVDAANPLAGKPFYVDPASAAMVAARNANPPNAELTSVANTPQSYWLDQAFPPA--TVGGTVARYTGAAQ----AAGAMPVLTLYGIPHRDCGSYASGGFAT---GTDYR-GWIDAVASGLG------SSPATIIVEPDALAMADC----------L-SPDQRQERFDLVRYAVDTLTRDPAAAVYVDAGHSRWLS--------AEAMAARLNDVG--VGRARGFSLNVSNFYTTDE---------------------------EIGYGEAISGL----TN--GSHYVIDTSRNGAGPAP-----------------------DAPLNWCNPSGRALGAPPTTATAGAHADAYLWIKRPGESDGTCGR--------------------------------GEPQAGRFVSQYAIDLAHNAGQ |
| 4B4H Chain:A ((141-556)) | --------------------------------------------------------------------------------------VDNPFEGAKLYVNPVWSAKAAAE------PGGSAVANESTAVWLDRIGAIEGN---MGLRDHLEEAVRQSGGDPLTIQVVIYNLPGRDCAALASNGELGPDELDRYKSEYIDPIADIMWDFADYENLRIVAIIEIDSLPNLVTNVGGNGGTELCAYMKQNGGYVNGVGYALRKLGEIPNVYNYIDAAHHGWIGWDSNFGPSVDIFYEAANASGSTVDYVHGFISNTANYSATVEPYLDVNGTVNGQLIRQSKWVDWNQYVDELSFVQDLRQALIAKGFRSDIGMLIDTSRNGWGGPNRPTGPSSSTDLNTYVDESRIDRRIHPGNWCNQAGAGLGERPTVNP-APGVDAYVWVKPPGESDGASEEIPNDEGKGFDRMCDPTYQGNARNGNNPSGALPNAPISGHWFSAQFRELLANAYP |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4B4H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -77708 for 2450 contacts (-31.7/contact) +
2D Compatibility (PS) -30847 + (NN) -17420 + (LL) 6924
1D Compatibility (HY) -12000 + (ID) 4400
Total energy: -135451.0 ( -55.29 by residue)
QMean score : 0.509
|
|
|