Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDECVVDAAAVVDALAGKGASAIVLRGLLKESISNAPHLLDAEVGHALRRAVLSDEISEEQARAALDALPYLIDNRYPHSPRLIEYTWQL-R--------HNVTFYDALYVALATALDVPLLTGDSRLAAAPGLPCEIKLVR
3H87 Chain:A ((18-142))
DQRWLIDKSALVRLTDS-P-DMEIWSNRIERGLVHITGVTRLEVGFSAECGE-------IARREFREPPLS-AMPVEYLTPRIEDRALEVQTLLADRGHHRGPSIPDLLIAATAELSGLTVLHVDKDFDAIAALT-------
General information:
TITO was launched using:
RESULT:
Template:
3H87.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -48845 for 828 contacts (-59.0/contact) +
2D Compatibility (PS) -12778 + (NN) -3891 + (LL) 1736
1D Compatibility (HY) -1200 + (ID) 850
Total energy: -65828.0 ( -79.50 by residue)
QMean score : 0.385
(partial model without unconserved sides chains):
PDB file :
Tito_3H87.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3H87-query.scw
PDB file :
Tito_Scwrl_3H87.pdb
: