Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQDSIFNLLTEEQLRGRNTLKWNYFGPDVVPLWLAEMDFPTAPAVLDGVRACVDNEEFGYPPLGE-DSLPRATADWCRQRYGWCPRPDWVRVVPDVLKGMEVVVEFLTRPESPVALPVPAYMPFFDVLHVTGRQRVEVPMVQQDSGRYLLDLDALQAAF-VRGAGSVIICNPNNPLGTAFTEAELRAIVDIAARHGARVIADEIWAPVVYG-SRHVAAASVSEAAAEVVVTLVSASKGWNLPGLMCAQVILSNRRDAHDWD-RINM-LHRMGASTVGIRANIAAYHHGESWLDELLPYLRANRDHLARALPELAPGVEVNAPDGTYLSWVDFRALAL-PSEPAEYLLSKAKVALSPGIPFGAAVGSGFARLNFATTRAILDRAIEAIAAALRDIID |
| 1D2F Chain:A ((30-389)) | ----------------------------LLPFTISDMDFATAPCIIEALNQRLMHGVFGYSR-WKNDEFLAAIAHWFSTQHYTAIDSQTVVYGPSVIYMVSELIRQWSETGEGVVIHTPAYDAFYKAIEGNQRTVMPVALEK-QADGWFCDMGKLEAVLAKPECKIMLLCSPQNPTGKVWTCDELEIMADLCERHGVRVISDEIHMDMVWGEQPHIPWSNVA---RGDWALLTSGSKSFNIPALTGAYGIIENSSSRDAYLSALKGRDGLSSPSVLALTAHIAAYQQGAPWLDALRIYLKDNLTYIADKMNAAFPELNWQIPQSTYLAWLDLRPLNIDDNALQKALIEQEKVAIMPGYTYGE-EGRGFVRLNAGCPRSKLEKGVAGLINAIRAV-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1D2F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -258358 for 2997 contacts (-86.2/contact) +
2D Compatibility (PS) -38969 + (NN) -18895 + (LL) 2500
1D Compatibility (HY) -25200 + (ID) 5000
Total energy: -343922.0 ( -114.76 by residue)
QMean score : 0.527
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