Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLAQATTAGSFNHHASTVLQGCRGVPAAMWSEPAGAIRRHCATIDGMDCEVAREALSARLDGERAPVPSARVDEHLGECSACRAWFTQVASQAGDLRRLAE-SRPVVPPVGRLGIRRAPRRQHSPMTWRRWALLCVGIAQIALGTVQGFGLDVGLTHQHPTGAGTHLLNESTSWSIALGVIMVGAALWPSAAAGLAGVLTAFVAILTGYVIVDALSGAVSTTRILTHLPVVIGAVLAIMVWRSASGPRPRPDAVAAEPDIVLPDNASRGRRRGHLWPTDGSAA |
1OR7 Chain:C ((2-58)) | ---------------------------------------------------QKEQLSALMDGETLDSE---LLNELAHNPEMQKTWESYHLIRDSMRGDTPEVLH--FDISSR-------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1OR7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -15170 for 286 contacts (-53.0/contact) +
2D Compatibility (PS) -6024 + (NN) -4089 + (LL) 15244
1D Compatibility (HY) -1600 + (ID) 450
Total energy: -12089.0 ( -42.27 by residue)
QMean score : 0.543
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