Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRYLPVSTRRIWVNPLCHFSFTVISGALFVSARRYDSNMLANSREELVEVFDALDAD-LDRLDEVSFEVLSTPERLRSLERLECLAR--RLPAAQHTLINQLD--TQASEEELGGTLCCALANRLRITKPEAGRRSAEAKP--
4Q7O Chain:A ((4-136))
MKN----------NIFLNLNKKSINNNHFVISIFFETIYQFETKDTLLECFKNITTTGHFGVIGAQYEKIDATRWIGDYEEVNGFEYIDKAPSIYFSVGDDFNPEELIIPINLAYHYFNIAISDFLIAHPEYQKKCKEIQKTY
General information:
TITO was launched using:
RESULT:
Template:
4Q7O.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -28068 for 906 contacts (-31.0/contact) +
2D Compatibility (PS) -13159 + (NN) -1918 + (LL) 1004
1D Compatibility (HY) -6000 + (ID) 800
Total energy: -48941.0 ( -54.02 by residue)
QMean score : 0.334
(partial model without unconserved sides chains):
PDB file :
Tito_4Q7O.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4Q7O-query.scw
PDB file :
Tito_Scwrl_4Q7O.pdb
: