Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSEVVTAAPAPPVVRLPPAV-RGPKLFQGLAFVVSRRRLLGRFVRRYGKAFTANILMYGRVVVVADPQLARQVFTSSPEELGNIQP--NLSRMFGSGSVFALDGDDHRRRRRLLAPPFHGKSMKNYETIIEEETLRETANWPQGQAFATLPSMMHITLNAILRAIFGAGGSEL--DELRRLIPPWVTLGSRLAALPKPKRDYGRLSPWGRLAEWRRQYDTVIDKLIEAERADPNFADRTDVLALMLRSTYDD-GSIMSRKDIGDELLTLLAAGHETTAATLGWAFERLSRHPDVLAALVEEVDNGG-------------HELRQAAILEVQRARTVIDFAARRVNPPVYQLGEWVIPRGYSIIINIAQIHGDPDVFPQPDRFDPQRYIGSKP----SPFAWIPFGGGTRRCVGAAFANMEMDVVLRTVLRHFTLETTTAAG-ERSHGRGVAFTPKDGGRVVMRRR |
| 2CIB Chain:A ((5-448)) | --------------ALPRVSGGHDEHGHLEEFRTDPIGLMQRVRDELGDVGTFQLAG-KQVVLLSGSHANEFFFRAGDDDLDQAKAYPFMTPIFG----------------------LRGEQMKGHAATIEDQVRRMIADWGEAGEIDLLDFFAELTIYTSSACLIGKKFRDQLDGRFAKLYHELERGTDPL---AYVDPYL-PIESFRRRDEARNGLVALVADIMNGRIANP----DRDMLDVLIAVKAETGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHPPLIILMRVAKG-EFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEMAQPPESYRNDHSKMVVQLAQPAAVRYRRR |
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General information:
TITO was launched using:
| RESULT:
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Template: 2CIB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -215220 for 3233 contacts (-66.6/contact) +
2D Compatibility (PS) -43731 + (NN) -26654 + (LL) 2256
1D Compatibility (HY) -17600 + (ID) 4300
Total energy: -305249.0 ( -94.42 by residue)
QMean score : 0.503
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