Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNAPKLVIGANGFLGSHVTRQLVADCAPQKGEVRAMVR-PAA-NTRS---ID-DLPLTRFHGDVFDTATVAEAMA--GCDDVYYCVVDTRAWL--RDPSPLFRTNVAGLRNVLDVATDAS-LRRFVFTSSYATVGRRRGH----------------VATEEDRVDTRKVTPYVRSRVAAEDLVLQYAHDAGLPAVAMCVSTTYGGGDWGR---TPHGAFIAGAV---FGR-LPFT-M---RGIRLEAVGVDDAARALILAAER--GRNGERYLISER---MMPLQEVVRIAADEAGVPPPRWSISVPVLYALGALGSLRARLTGKDTELSLASVRMMRSEADVDHGKAVRELGWQPR-PVEESIREAARFWAAMRTVGKDPAAS |
| 1ORR Chain:A ((2-339)) | --AKLLITGGCGFLGSNLASFALS----QGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQL--DFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRD-VLHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMRFTNLPV--------------------R--E-----SDQRVFVADIKKITNAIDWSPKVSAKDGVQKMYDWTSSI---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ORR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -153453 for 2526 contacts (-60.7/contact) +
2D Compatibility (PS) -31669 + (NN) -5968 + (LL) 2488
1D Compatibility (HY) -8800 + (ID) 3050
Total energy: -200452.0 ( -79.36 by residue)
QMean score : 0.515
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