Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTLAAEPHPAPPQQPTVAWSEPDVDRRVEFWPTVAIRSALESGDIATWQRIAAALKRDPYGRTARQVEEVLEGIPATGIANAFWEVLDRARTHLDANERAEVARQVGLLLDRSGLQRQEFASRIGVTAQDLTAYLDGIVSPSASLMIRMRRLSDRFVRAKSVRAADS
2B5A Chain:A ((6-60))
------------------------------------------------------------------------------------------------EIKRKFGRTLKKIRTQKGVSQEELADLAGLHRTYISEVERGDRNISLINIHKICA----------------
General information:
TITO was launched using:
RESULT:
Template:
2B5A.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29920 for 357 contacts (-83.8/contact) +
2D Compatibility (PS) -6336 + (NN) -4390 + (LL) 8324
1D Compatibility (HY) -800 + (ID) 350
Total energy: -33472.0 ( -93.76 by residue)
QMean score : 0.764
(partial model without unconserved sides chains):
PDB file :
Tito_2B5A.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2B5A-query.scw
PDB file :
Tito_Scwrl_2B5A.pdb
: