Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRGIILAGGSGTRLYPITMGISKQLLPVYDKPMIYYPLTTLMMAGIRDIQLITTPHDAPGFHRLLGDGAHLGVNISYATQDQPDGLAQAFVIGANHIGADSVALVLGDNIFYGPGLGTSLKRFQSISGGA-IFAYWVANPSAYGVVEFGAEGMALSLEEKPVTPKSNYAVPGLYFYDNDVIEIARGLKKSARGEYEITEVNQVYLNQGRLAVEVLARGTAWLDTGTFDSLLDAADFVRTLERRQGLKVSIPEEVAWRMGWIDDEQLVQRARALVKSGYGNYLLELLERN |
5IDT Chain:D ((13-298)) | -KGIILAGGSGTRLHPATLAISKQLLPVYDKPMIYYPLSTLMLAGMRDVLVISTPQDTPRFQQLLGDGSQWGMNLQYAVQPSPDGLAQAFIIGEQFIGNAPSALVLGDNIYYGHDFQPLLKAADAQSSGATVFAYHVHDPERYGVVQFNAQGQAVSIEEKPKAPKSNYAVTGLYFYDQQVVDIAKAVKPSARGELEITSVNQAYMQQGQLNVQTMGRGYAWLDTGTHDSLLDASQFIATLENRQGLKVACPEEIAWRSGWINASQLEALVQPLTKNGYGQYLMQILK-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5IDT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -221427 for 2361 contacts (-93.8/contact) +
2D Compatibility (PS) -30547 + (NN) -12560 + (LL) 228
1D Compatibility (HY) -31200 + (ID) 8850
Total energy: -304356.0 ( -128.91 by residue)
QMean score : 0.585
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