Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSVYKVIDIIGTSPTSWEQAAAEAVQRARDSVDDIRVARVIEQDMAVDSAGKITYRIKLEVSFKMRPAQPR
3ONR Chain:D ((3-69))
-SVYKVIDIIGTSPTSWEQAAAEAVQRARDSVDDIRVARVIEQDMAVDSAGKITYRIKLEVSFKMRPS---
General information:
TITO was launched using:
RESULT:
Template:
3ONR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -23369 for 396 contacts (-59.0/contact) +
2D Compatibility (PS) -7720 + (NN) -5894 + (LL) 288
1D Compatibility (HY) -8800 + (ID) 3300
Total energy: -48795.0 ( -123.22 by residue)
QMean score : 0.650
(partial model without unconserved sides chains):
PDB file :
Tito_3ONR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ONR-query.scw
PDB file :
Tito_Scwrl_3ONR.pdb
: