Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSEVASRELRNDTAGVLRRVR-AGEDVTITVSGRPVAVLTPVRPRRRRWLSKTEFLSRLRGAQADPGLRNDLAVLAGDTTEDLGPIR
3D55 Chain:A ((1-44))
-MSISASEARQRLFPLIEQVNTDHQPVRITSRA-GDAVLMSADDYD-----------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3D55.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8496 for 245 contacts (-34.7/contact) +
2D Compatibility (PS) -4912 + (NN) -4377 + (LL) 2540
1D Compatibility (HY) -1600 + (ID) 450
Total energy: -17295.0 ( -70.59 by residue)
QMean score : 0.568
(partial model without unconserved sides chains):
PDB file :
Tito_3D55.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3D55-query.scw
PDB file :
Tito_Scwrl_3D55.pdb
: