Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSVNDGVDQMGAEPDIMEFVEQMGGYFESRSLTRLAGRLLGWLLVCDPERQSSEELATALAASSGGISTNARMLIQFGFIERLAVAGDRRTYFRLRPNAFAAGERERIRAMAELQDLADVGLRALGDAPPQRSRRLREMRDLLAYMENVVSDALGRYSQRTGEDD
3BRO Chain:A ((14-106))
-------------IASNQMSTRFDIFAKKYDLTGTQMTIIDYLSRNKNKEVLQRDLESEFSIKSSTATVLLQRMEIKKLLYRKVSGKDSRQKCLKLTKKANKLETI-----------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3BRO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43260 for 612 contacts (-70.7/contact) +
2D Compatibility (PS) -9898 + (NN) -1742 + (LL) 4732
1D Compatibility (HY) 1200 + (ID) 450
Total energy: -49418.0 ( -80.75 by residue)
QMean score : 0.254
(partial model without unconserved sides chains):
PDB file :
Tito_3BRO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3BRO-query.scw
PDB file :
Tito_Scwrl_3BRO.pdb
: