Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MARCDVLVSADWAESNLH----APKVVFVEVDED-------TSAYDRDHIAGAIKLDWRTDLQD--PVKRDFVDAQQFSKLLSERGIANEDTVILYGGNN--NWFAAYAYWYFKLYGHEKVKLLDGGRKKWELDGRPLSSDPVSRPVTSYTASPPDNTIRAFRDEVLAAI--NVKNLIDVRSPDEFSGKILAPAHLPQEQSQRPGHIPGAINVPWSRAANEDGTFKSDEELAKLYADAGLDNSKETIAYCRIGERSSHTWFVLRELLGHQNVKNYDGSWTEYGSLVGAPIELGS |
| 1RHS Chain:A ((7-285)) | ----RALVSTKWLAESVRAGKVGPGLRVLDASWYSPGTREARKEYLERHVPGASFFDIEECRDKASPYEVMLPSEAGFADYVGSLGISNDTHVVVYDGDDLGSFYAPRVWWMFRVFGHRTVSVLNGGFRNWLKEGHPVTSEPSRPEPAIFKA-TLNRSLLKTYEQVLENLESKRFQLVDSRAQGRYLGTQPEPD----AVGLDSGHIRGSVNMPFMNFLTEDGFEKSPEELRAMFEAKKVDLTKPLIAT-RKGVTACHIALAAYL-CGKPDVAIYDGSWFEWFH-RAPPE---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1RHS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -83624 for 2173 contacts (-38.5/contact) +
2D Compatibility (PS) -28583 + (NN) -19305 + (LL) 1168
1D Compatibility (HY) -13600 + (ID) 3500
Total energy: -147444.0 ( -67.85 by residue)
QMean score : 0.472
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