Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAEPLLVVGLGNPGANYARTRHNLGFVVADLLAARLGAKFKAHKRSGAEVATGRSAGRSLVLAKPRCYMNESGRQIGPLAKFYSVAPANIIVIHDDLDLEFGRIRLKIGGGEGGHNGLRSVVAALGTKDFQRVRIGIGRPPGRKDPAAFVLENFTPAERAEVPTICEQAADATELLIEQGMEPAQNRVHAW
4OLJ Chain:A ((4-193))
MSNISLIVGLGNPGSEYAQTRHNAGFWFVEQLADKYGITLKNDPKFHGISGRGNIEGHDVRLLLPMTYMNRSGQSVVPFSKFYQIAPEAILIAHDELDMNPGVIRLKTGGGHGGHNGLQDIVPHIGP-NFHRLRIGIGHPGSKERVSGHVLGKAPSNEQSLMDGAIDHALSKVKLLVQGQVPQAMNQINAY
General information:
TITO was launched using:
RESULT:
Template:
4OLJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -117203 for 1625 contacts (-72.1/contact) +
2D Compatibility (PS) -20006 + (NN) -2838 + (LL) 64
1D Compatibility (HY) -13600 + (ID) 3700
Total energy: -157283.0 ( -96.79 by residue)
QMean score : 0.536
(partial model without unconserved sides chains):
PDB file :
Tito_4OLJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4OLJ-query.scw
PDB file :
Tito_Scwrl_4OLJ.pdb
: