Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTYETILVERDQRVGIITLNRPQALNALNSQVMNEVTSAATELDDDPDIGAIIITGSAKAFAAGADIKEMADLTFADAFTADFFATWGKLAAVRTPTIAAVAGYALGGGCELAMMCDVLIAADTAKFGQPEIKLGVLPGMGGSQRLTRAIGKAKAMDLILTGRTMDAAEAERSGLVSRVVPADDLLTEARATATTISQMSASAARMAKEAVNRAFESSLSEGLLYERRLFHSAFATEDQSEGMAAFIEKRAPQFTHR
3Q0G Chain:C ((1-255))
MTYETILVERDQRVGIITLNRPQALNALNSQVMNEVTSAATELDDDPDIGAIIITGSAKAFAAGADIKEMADLTFADAFTADFFATWGKLAAVRTPTIAAVAGYALGGGCELAMMCDVLIAADTAKFGQPEIKLGVLPGMGGSQRLTRAIGKAKAMDLILTGRTMDAAEAERSGLVSRVVPADDLLTEARATATTISQMSASAARMAKEAVNRAFESSLSEGLLYERRLFHSAFATEDQSEGMAAFIEKRAPQFT--
General information:
TITO was launched using:
RESULT:
Template:
3Q0G.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -129355 for 2090 contacts (-61.9/contact) +
2D Compatibility (PS) -27593 + (NN) -8631 + (LL) 144
1D Compatibility (HY) -30800 + (ID) 12750
Total energy: -208985.0 ( -99.99 by residue)
QMean score : 0.395
(partial model without unconserved sides chains):
PDB file :
Tito_3Q0G.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3Q0G-query.scw
PDB file :
Tito_Scwrl_3Q0G.pdb
: