Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------------------MVGDCPRSRTVRWSWDTGHVTAEP---QPTPRPAKPRLLQDGRD------------------MFWSLAPLVVGCILLAGLVGMCSF------------------QLGGTKRGPIPSYDAAQALRADAKTLGFPIR--LPQLPGGW---TPNSGGRGGIENGRADP-------ATGQRRNAATSIVGFISPTGRYLSLTQSNADEDKLVGSIHPSMYPTGTVDVGGTRWVVYEGS-----DENGAVEPVWTTRLTGPGGATQLA-ITGAGSI-------DQFRTLASATQSQPPLPAR |
| 3J6V Chain:I ((68-396)) | SYTVDFIKKQIEEFNIGKRHLANMMGEDPETFTQEDVDRAITYLFPSGLFEKRARPIMKHPEEIFPKQRAVQWGEDGRPFHFLFYTGKQSYYSLMHEAYGKVLHAEERQDQLRAKGLFSEKSKSKDLIGSRWLIKEELEEMLVEKLSDQDYAQFIRLLERLSALPCDAAEEEFVGRFRRTVTVQSKKHLIEPLQYDEQGMAFSTGQGKRKTANAEAVVYGHGSGKIEINGVDYLLYFPVTQDREQLMFPFHFLDRLGKHDVTCTVSGGGRSSQAGAIRLAMSRALCSFITEDEVEWMRQAGLLTTDPRVRERKKPGQEGARRKFTWKKR |
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General information:
TITO was launched using:
| RESULT:
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Template: 3J6V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 12318 for 1526 contacts (8.1/contact) +
2D Compatibility (PS) -24864 + (NN) -17987 + (LL) 0
1D Compatibility (HY) -1600 + (ID) 2050
Total energy: -34183.0 ( -22.40 by residue)
QMean score : 0.193
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