Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSTVTGAAGIGLATLAADGSVLDTWFPAPELTESGTSATSRLAVSDVPVELAALIGRDDDRRTETIAVRTVIGSLDDVAADPYDAYLRLHLLSHRLVAPHGLNAGGLFGVLTNVVWTNHGPCAIDGFEAVRARLRRRGPV-TVYGVDKFPRMVDYVVPTGVRIADADRVRLGAHLAPGTTVMHEGFVNYNAGTLGASMVEGRISAGVVVGDGSDVGGGASIMGTLSGGGTHVISIGKRCLLGANSGLGISLGDDCVVEAGLYVTAGTRVTMPDSNS-----VKARELSGSSNLLFRRNSVSGAVEVLARDGQGIALNEDLHAN |
3R5C Chain:C ((79-345)) | ---------------------------------------------------SALLSRLAESQKPLVA--TLLAE-DAAPSSTAEAYLKLHLLSHRLVKPHAVNLSGIFPLLPNVAWTNIGAVDLAELAELQLEARLKGKLLEVFSVDKFPKMTDYVVPAGVRIADTARVRLGAYIGEGTTVMHEGFVNFNAGTEGPGMIEGRVSAGVFVGKGSDLGGGCSTMGT-----NIVISVGEGCLIGANAGIGIPLGDRNIVEAGLYITAGTKVALLDEQNALVKVVKARDLAGQPDLLFRRNSQNGAVEC-KTNKTAIELNEALHA- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3R5C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -163011 for 1979 contacts (-82.4/contact) +
2D Compatibility (PS) -28607 + (NN) -19096 + (LL) 3164
1D Compatibility (HY) -26800 + (ID) 7150
Total energy: -241500.0 ( -122.03 by residue)
QMean score : 0.423
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