Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSVGEGPDTKPTARGQPAAVGRVVVLSGPSAVGKSTVVRCLRERIP--NLHFSVSATTRAPRPGEVDGVDYHFIDPTRFQQLIDQGELLEWAEIHGGLHRSGTLAQPVRAAAATGVPVLIEVDLAGARAIKKTMPEAVTVFLAPPSWQDLQARLIGRGTETADVIQRRLDTARIELAAQGDFDKVVVNRRLESACAELVSLLVGTAPGSP
2F3T Chain:B ((2-183))
------------------AQGTLYIVSAPSGAGKSSLIQALLKTQPLYDTQVSVSHTTRQPRPGEVHGEHYFFVNHDEFKEMISRDAFLEHAEVFGNYY--GTSREAIEQVLATGVDVFLDIDWQGAQQIRQKMPHARSIFILPPSKIELDRRLRGR---SEEVIAKRMAQAVAEMSHYAEYDYLIVNDDFDTALTDLKTII--------
General information:
TITO was launched using:
RESULT:
Template:
2F3T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -104232 for 1299 contacts (-80.2/contact) +
2D Compatibility (PS) -20069 + (NN) -11206 + (LL) -68
1D Compatibility (HY) -13600 + (ID) 3250
Total energy: -152425.0 ( -117.34 by residue)
QMean score : 0.521
(partial model without unconserved sides chains):
PDB file :
Tito_2F3T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2F3T-query.scw
PDB file :
Tito_Scwrl_2F3T.pdb
: