Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MMPTEYPATAEESVDVITDALLTASRLLVAISAHSIA-QVDENITIPQFRTLVILSNHGPINLATLATLLGVQPSATGRMVDRLVGAELIDRLPHPTSRRELLAALTKRGRDVVRQVTEHRRTEIARIVEQMAPAERHGLVRALTAFTEAGGEPDARYEIE
2FA5 Chain:A ((12-157))
------HPVLLNLEQFLPYRLSVLSNRISGNIAKVYGDR--YGMAIPEWRVITILALYPGSSASEVSDRTAMDKVAVSRAVARLLERGFIR---------RSMLALSPAGRQVYETVAPLVNEMEQRLMSVFSAEEQQTLERLIDRLAKDGLPR-------
General information:
TITO was launched using:
RESULT:
Template:
2FA5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -69515 for 862 contacts (-80.6/contact) +
2D Compatibility (PS) -14154 + (NN) -4242 + (LL) 1576
1D Compatibility (HY) -6000 + (ID) 1250
Total energy: -93585.0 ( -108.57 by residue)
QMean score : 0.389
(partial model without unconserved sides chains):
PDB file :
Tito_2FA5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FA5-query.scw
PDB file :
Tito_Scwrl_2FA5.pdb
: