Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTILVVTGTGTGVGKTVVCAALASAARQAGIDVAVCKPVQTGTARG---DDDLAEVGRLAGV---TQLAGLARYPQPMAPAAAAEHAGMALPARDQIVRLI-ADLDRPGRLTLVEGAGGLLVELAEPGVTLRDVAVDVAAAALVVVTADLGTLNHTKLTLEALAAQQVSCAGLVIGSWPDPPGLVAASNRSALAR-IA-MVRAALPAGAASLDAGDFAAMSAAAFDRNWVAGLVG
3OF5 Chain:A ((4-219))
MKKFFIIGTDTEVGKTYISTKLIEVCEHQNIKSLCLKPVASGQSQFSELCEDVESILNAYKHKFTAAEINLISFNQAVAPHIIAAKT-KVDISIENLKQFIEDKYNQDLDILFIEGAGGLLTPYSDH-TTQLDLIKALQIPVLLVSAIKVGCINHTLLTINELNRHNIKLAGWIANCNDSNIKYI-DEQINTIEELSGYKCSAKISRNADYLDFIDLSK----------------
General information:
TITO was launched using:
RESULT:
Template:
3OF5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -124391 for 1659 contacts (-75.0/contact) +
2D Compatibility (PS) -22579 + (NN) -13141 + (LL) 1004
1D Compatibility (HY) -12000 + (ID) 2300
Total energy: -173407.0 ( -104.53 by residue)
QMean score : 0.348
(partial model without unconserved sides chains):
PDB file :
Tito_3OF5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OF5-query.scw
PDB file :
Tito_Scwrl_3OF5.pdb
: