Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MASDLYLGYRNDDADTPFGKFFKPEMAPLPQHVVVALQHGPQAGMALLAFDDAASIVDE-GYQQTENGYGILGDGSMQVSVRTDMPGVTPAMWAWWFGWHGSDTRRYKLWHPRAHLSARWKDGDQDSGAGRRGAQRYVGRWSMISEYIGSTKLGAAIQFVEPAAMGLPDDSDDTVSICARLGSADAPVDAGWFVHQVRSTPGGSEMRSRFWMGGPHIAVRKA---PEVASKAVR-----PIASKLIGVSESTARNLLVYCAQEMNHLAGFLADLWESFGDE |
| 1E42 Chain:A ((26-258)) | -----------GGYVAPKAVWLPAVKAKGLEISGTFTHRQGHIYMEMNFTNKALQHMTDFAIQFNKNSFGVIPSTPLAIHTP----------------LMPNQSIDVSLPLNT----------LGPVMKMEPLNNLQVAVKNNIDVFYFSCLIPLNVLFVEDGKMERQVFLATWKDI---------PNENELQFQIKECHLNADTVSSKLQNNNVYTIAKRNVEGQDMLYQSLKLTNGIWILAELRIQPGNPNYTLSLKCRA--PEVSQYIYQVYDSILKN |
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General information:
TITO was launched using:
| RESULT:
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Template: 1E42.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -42461 for 1707 contacts (-24.9/contact) +
2D Compatibility (PS) -23575 + (NN) -5272 + (LL) 2884
1D Compatibility (HY) -5200 + (ID) 1150
Total energy: -74774.0 ( -43.80 by residue)
QMean score : 0.249
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