Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------MIRELVTTAAITGAAI-GGAPVAG-ADPQRYDGDVPGMNYDASLGAPCSSWERFIFG---------------RGPSGQAEACHFPPPNQFPPAETGYWVISYPLY--GVQQVGAPCPKPQAAAQSPDGLPMLCLGARGW-------------QPGWFTGAGFFPPEP----------------- |
| 3GW4 Chain:A ((8-199)) | DYALAERQAQALLAHPATASGARFMLGYVYAFMDRFDEARASFQALQQQAQKSGDHTAEHRALHQVGMVERMAGNWDAARRCFLEERELLASLPEDPLAASANAYEVATVALHFGDLAGARQEYEKSLVYAQQADDQVAIACAFRGLGDLAQQEKNLLEAQQHWLRARDIFAELEDSEAVNELMTRLNGLEH |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GW4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 6456 for 932 contacts (6.9/contact) +
2D Compatibility (PS) -12455 + (NN) 17364 + (LL) 0
1D Compatibility (HY) 7200 + (ID) 850
Total energy: 17715.0 ( 19.01 by residue)
QMean score : -0.199
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