Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTYVIGSECVDVMDKSCVQECPVDCIYEGARMLYINPDECVDCGACKPACRVEAIYWEGDLPDDQHQHLGDNAAFFHQVLPGRVAPLGSPGGAAAVGPIGVDTPLVAAIPVECP
1FRM Chain:A ((2-74))
--FVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCAPECPAQAIFSEDEVPEDMQEFIQLNAEL---------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1FRM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -60984 for 510 contacts (-119.6/contact) +
2D Compatibility (PS) -7474 + (NN) -5054 + (LL) 1704
1D Compatibility (HY) -9600 + (ID) 1500
Total energy: -82908.0 ( -162.56 by residue)
QMean score : 0.302
(partial model without unconserved sides chains):
PDB file :
Tito_1FRM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FRM-query.scw
PDB file :
Tito_Scwrl_1FRM.pdb
: