Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MADRVLRGSRLGAVSYETDRNHDLAPRQIARYRTDNGEEFEVPFADDAEIPGTWLCRNGMEGTLIEGDLPEPKKVKPPRTHWDMLLERRSIEELEELLKERLELIRSRRRG
2L5B Chain:A ((1-31))
-------------------------------------------------------------------------APGALPTYWPWLCAAAQVAALAAWLLGRRNL-------
General information:
TITO was launched using:
RESULT:
Template:
2L5B.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -963 for 112 contacts (-8.6/contact) +
2D Compatibility (PS) -3579 + (NN) -4578 + (LL) 3924
1D Compatibility (HY) -2800 + (ID) 350
Total energy: -8346.0 ( -74.52 by residue)
QMean score : 0.492
(partial model without unconserved sides chains):
PDB file :
Tito_2L5B.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2L5B-query.scw
PDB file :
Tito_Scwrl_2L5B.pdb
: