Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAMVNTTTRLSDDALAFLSERHLAMLTTLRADNSPHVVAVGFTFDPKTHIARVITTGGSQKAVNADRSGLAVLSQVDG-------------ARWLSLEGRAAVNSDIDAVRDAELRYAQRYRTP------RPNPRRVVIEVQIERVLGSADLLDRA
2FG9 Chain:A ((26-172))
--------EDKQRIESIILQADACFVGITDLEGNPYVVPMNFGYEND--TLYLHSGPEGGKIEMLQRNNNVCITFSLGHKLVYQHCSYSMRSESAMCRGKVEFIEDMEEKRHALDIIMRHYTKDQFSYSDPAVRNVKVWKVPVDQMTGKVFGL---
General information:
TITO was launched using:
RESULT:
Template:
2FG9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -45795 for 865 contacts (-52.9/contact) +
2D Compatibility (PS) -13470 + (NN) -3638 + (LL) 1092
1D Compatibility (HY) -2800 + (ID) 800
Total energy: -65411.0 ( -75.62 by residue)
QMean score : 0.518
(partial model without unconserved sides chains):
PDB file :
Tito_2FG9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FG9-query.scw
PDB file :
Tito_Scwrl_2FG9.pdb
: